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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943995.1_cds_XP_016486937.1_77727
CDS Infomation

[gene=LOC107807132] [db_xref=GeneID:107807132] [protein=E3 ubiquitin-protein ligase At1g12760-like] [protein_id=XP_016486937.1] [location=join(66812..67473,68612..68737,68834..69191)] [gbkey=CDS]
Sequence

ATGGCCAGTTCCTTGATAGGGCTACACCGGAAAAGCCAAACTAACCAGTTCCAATTATTA
ATGGAGCAAGCAAATAACCGTAGCAATGATGAGCATGTCATTGACATAACGAGTAGCAGC
GATGCATCCTCATCAAGCAACCCCCATGATAGACCAGTCAATAACTTGCTGCATGAACAA
GCTGAAGATCAGCCATCAACAAGCACAGCAGTGCCTGTCTCACAACATGCATTTTCTTCT
GCTAATAGATCAAACTTGAGGAACTCATCATTTGTTCGAAGAGGAAATGGGCGTAGCCGC
CATCGGAGTCCTCTGAATTCCTTGCTATGGATATCCATTGAATTAGTCTTGACAGTGAGC
CAAATAATTGCAGCAGTTGTAGTGTTGGCCATGTCAAGGGATGAGCACCCACGTGCTCCA
CTATCCCAATGGATCGTCGGTTATGCATCTGGGTGTGTAGCAATTCTCCCTCTTCTCTAT
TGGCGTTTTCGTCACAGAAACCAGAATTCAGATCAGGATTCATCTCAGCAGCAACAGGGT
GCTTCGCAGACTGAACTCTCAGCCAGACCTTCATCGAGTACAAGGAGTTCAGAAGTTGAA
GGTCGTCAGACAACTGGTACAGCTTCTATAGGTGGTCAAAGTAGTGGACTACAGAGCAGA
AGGTTAAAGGCACTCGTTGACTACTTTAAAATGGCACTAGATTGCTTTTTTGCAGTGTGG
TTTGTGGTTGGCAATGTCTGGATATTTGGCGGACACTCTTCTTCCTCTGAGGCTCCTAAC
TTGTACAGGTTGTGTATAGTATTTCTAACCTTTAGCTGTATCGGGTATGCGATGCCATTT
ATTCTATGTGCAACAATCTGCTGCTGCCTCCCCTGCATTATTTCAGTCATGGGCTTCAGA
GAAGATCTGACTCAAAACAAAGGAGCCACACCAGAATCAATTAATGCTCTTCCGACCTAT
AAATTTAAGGTAAAGAAAAACAAAAGTGGCTACAAAGAGGCTGCTGAAGGTGGGATTGTG
GCTGCAGGAACAGAAAAGGAGCGTGTCATATCAGGAGAAGATGCGGTAAATTTTTCCCGT
TTTGACATAGTTTTTTCTGGTTTATTTGTGTCCGTTTTAGTGACAAAATTCTCTTTTGAA
GAATGA

Peptide Sequence

PEP ID

XP_016486937.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Nicotiana tabacum]
Sequence

MASSLIGLHRKSQTNQFQLLMEQANNRSNDEHVIDITSSSDASSSSNPHDRPVNNLLHEQ
AEDQPSTSTAVPVSQHAFSSANRSNLRNSSFVRRGNGRSRHRSPLNSLLWISIELVLTVS
QIIAAVVVLAMSRDEHPRAPLSQWIVGYASGCVAILPLLYWRFRHRNQNSDQDSSQQQQG
ASQTELSARPSSSTRSSEVEGRQTTGTASIGGQSSGLQSRRLKALVDYFKMALDCFFAVW
FVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVMGFR
EDLTQNKGATPESINALPTYKFKVKKNKSGYKEAAEGGIVAAGTEKERVISGEDAVNFSR
FDIVFSGLFVSVLVTKFSFEE

Transcript Sequence

Gene sequence data has not been registered.